By Ruben Geert van den Berg on June 29, 2017 under SPSS ANOVA FAQ.

How to Run Levene’s Test in SPSS?

Levene's Test - What Is It?

If we want to compare 3(+) groups on a metric variable, we usually want to know if they have different mean scores. In most cases, we'll run an ANOVA in order to find out. However, this requires the homogeneity assumption which states that the population variances are equal for all groups.
You can safely ignore this assumption if you have (roughly) equal sample sizes for each group. However, if group sizes are (sharply) different, then you do need to make sure that homogeneity of variances is met by your data. A test for finding this out is Levene's test.

Null Hypothesis

The null hypothesis for Levene's test is that the groups we're comparing all have similar population variances. If this is true, we'll probably find slightly different variances in our samples from these populations. However, very different sample variances suggests that the population variances weren't equal after all. In this case we'll reject the null hypothesis of equal population variances.

Levene's Test - Assumptions

Levene's test basically requires two assumptions:

Levene's Test - Example

A fitness company wants to know if 2 supplements for stimlating body fat loss actually work. They test 2 supplements (a cortisol blocker and a thyroid booster) on 20 people each and another 40 people receive a placebo. All 80 participants have body fat measurements at the start of the experiment (week 11) and weeks 14, 17 and 20. This results in fatloss_unequal.sav, part of which is shown below.

Levenes Test in SPSS - Variable View

One approach to these data is comparing body fat percentages over the 3 groups (placebo, thyroid, cortisol) for each week separately.Perhaps a better approach to these data is using a single repeated measures ANOVA. Weeks would be the within-subjects factor and supplement would be the between-subjects factor. For now, we'll leave it as an exercise to the reader to carry this out. We can use an ANOVA for each of the 4 body fat measurements. Since we've unequal sample sizes, we need to make sure that each supplement group has the same variance on each of the 4 measurements first.

Running Levene's test in SPSS

Several SPSS commands contain an option for running Levene's test. The easiest way to go -especially for multiple variables- is the One-Way ANOVA dialog.The main limitation of the One-Way ANOVA dialog is that it doesn't include any measures of effect size. For more on this, see How to Get (Partial) Eta Squared from SPSS?.
Right, so we navigate to Analyze SPSS Menu Arrow Compare Means SPSS Menu Arrow One-Way ANOVA and fill out the dialog that pops up.

Levenes Test SPSS One Way ANOVA Menu

The Homogeneity of variance test under Options refers to Levene's test.

SPSS Levenes Test One Way ANOVA Dialog Homogeneity Of Variances

Clicking Paste results in the syntax below. Let's run it.

SPSS Levene's Test Syntax Example

*SPSS Levene's test syntax as pasted from Analyze - Compare Means - One-Way ANOVA.

ONEWAY fat11 fat14 fat17 fat20 BY condition
/STATISTICS DESCRIPTIVES HOMOGENEITY
/MISSING ANALYSIS.

Output for Levene's test

On running our syntax, we get several tables, the second of which is Test of Homogeneity of Variances. This holds the results of Levene's test.

SPSS Levenes Test Output

As a rule of thumb, we conclude that the variances are not equal if “Sig.” < 0.05. The body fat percentages in week 17 and week 20 have unequal population variances over our 3 treatment groups. That is, these 2 variables violate the homogeity of variance assumption needed for an ANOVA.

Descriptive Statistics Output

Remember that we don't need equal population variances if we have roughly equal sample sizes. A sound way for evaluating if this holds is inspecting the Descriptives table in our output.

SPSS Levene Test Unequal Sample Sizes

As we see, our ANOVA is based on sample sizes of 40, 20 and 20 for all 4 dependent variables. Because they're not (roughly) equal, we do need the homogeneity of variance assumption but it's not met by 2 variables.
In this case, we'll report some alternative results (Welch and Games-Howell) but these are beyond the scope of this tutorial.

Reporting Levene's test

Perhaps surprisingly, Levene's test is technically an ANOVA as we'll explain here. We therefore report it like a basic ANOVA too. So we'll write something like Levene's test showed that the variances for body fat percentage in week 20 were not equal, F(2,77) = 4.58, p = 0.013.

Levene's Test - How Does It Work?

Levene's test works very simply: a larger variance means that -on average- the data values are “further away” from their mean. The figure below illustrates this: watch the histograms become “wider” as the variances increase.

Variances Shown in Histograms

We therefore compute the absolute differences between all scores and their (group) mean. The means of the absolute differences should be roughly equal over groups. So technically, Levene's test is an ANOVA on the absolute differences. In other words: we run an ANOVA (on absolute differences) to find out if we can run an ANOVA (on our actual data).
If that just sounds too weird, then try running the syntax below. It does exactly what I just explained.

“Manual” Levene's Test Syntax

*Add group means on fat20 to dataset.

aggregate outfile * mode addvariables
/break condition
/mfat20 = mean(fat20).

*Compute absolute differences between fat20 and group means.

compute adfat20 = abs(fat20 - mfat20).

*Run minimal ANOVA on absolute differences. F-test identical to previous Levene's test.

ONEWAY adfat20 BY condition.

Result

SPSS Manual Levenes Test Output

As we see, these ANOVA results are identical to Levene's test in the previous output. I hope this clarifies why we report it as an ANOVA as well.

Thanks for reading!

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